The detailed information of tRNA gene sequence


Sequence ID>WENV180041498
Genome IDLLBZ010160781
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 794
End posion on genome 881
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttgtaattt
tRNA gene sequence 
GGAGAGTAGGTAAATATTGGTTTGTTACACCCGACTGCTAATCGGTTTACTCACAAGGTA
ATGAGGGTTCAATTCCCTTGCTCTCCGCtt
Downstream region at tRNA end position 
ttttnnnnnn
Secondary structure (Cloverleaf model)
>WENV180041498	Ser	GCT
                   t      GCtt ttttnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T + G          T T
                    A     T T C C C     A
    T A T A        G      + | | | |     A
  T         A A T G       G A G G G     C
  G         | | | |                 T T
  G         T T A C
    T T T G        A     TTACTCACAAGGTAAT
                    C   T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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