The detailed information of tRNA gene sequence


Sequence ID>WENV180041508
Genome IDLLBZ010162869
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 380
End posion on genome 469
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
nnnnnnncgc
tRNA gene sequence 
GGAGAGGTCGCATAGTGGATTAGTGCACCGGTCTCGAAAACCGGAGTGGGTTTACGCCCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gatgatttca
Secondary structure (Cloverleaf model)
>WENV180041508	Ser	CGA
                   c      GCCA gatgatttca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    A       G T G C
      T T A        A     AGTGGGTTTACGCCCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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