The detailed information of tRNA gene sequence


Sequence ID>WENV180041513
Genome IDLLBZ010165264
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1137
End posion on genome 1230
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gccgcgccgg
tRNA gene sequence 
GGGGCCGCAGGGTGGCTGGTGCTGCCTCTGATCTTCAAAATCAGCGAGGGCGGGGAAGAC
CCGCCCTGGTGGGTTCGATTCCCACGCGGTCCCGttc
Downstream region at tRNA end position 
ccgcgccccc
Secondary structure (Cloverleaf model)
>WENV180041513	SeC	TCA
                   g      Gttc ccgcgccccc
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G          T T
                    A     C A C C C     A
      T C G        G      | | | | |     G
    G       G T G G       G T G G G     C
    G       + + | |                 T T
    T       T G C C
      G C          T     CGAGGGCGGGGAAGACCCGCCCTG
                    C - G
                    T - A
                    G - C
                    A - T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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