The detailed information of tRNA gene sequence


Sequence ID>WENV180041585
Genome IDLLBZ010202538
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 242
End posion on genome 339
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggaccggcgc
tRNA gene sequence 
GGGAGCGGATGGGATCTGGTGGTCTCCGAGGACTTCAAATCCTTTCGTCGGGCGTCTCGG
ACGTCCGAGGTGGGTTCGATTCCCACACGTTCCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180041585	SeC	TCA
                   c      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       A G G G       G T G G G     C
    G       | | + |                 T T
    T       T C T C
      G G          C     TCGTCGGGCGTCTCGGACGTCCGAG
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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