The detailed information of tRNA gene sequence


Sequence ID>WENV180041721
Genome IDLLBZ010340062
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 2218
End posion on genome 2121
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcgcagctga
tRNA gene sequence 
GGGGGCGGATCCGTCCTGGTGGGCGGAGCGGTCTTCAAAACCGTCATGGCCTGGCTGAAC
CCCGGGCCGGTGGGTTCGATTCCCACACGTCCCCGCCA
Downstream region at tRNA end position 
ctcccccgga
Secondary structure (Cloverleaf model)
>WENV180041721	SeC	TCA
                   a      GCCA ctcccccgga
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G   A          T T
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       T G C C       G T G G G     C
    G       + | | |                 T T
    T       G C G G
      G G          A     CATGGCCTGGCTGAACCCCGGGCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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