The detailed information of tRNA gene sequence


Sequence ID>WENV180041760
Genome IDLLBZ010417364
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 639
End posion on genome 543
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taacgcgctt
tRNA gene sequence 
GGAGGTGTTGGGCTGCTGGTGTGGCCCCTGGACTTCAAATCCAGTGCTCCGGGTTAAGCC
CCCGGTGGGTGGGTTCGATTCCCATACACCTCCGCCA
Downstream region at tRNA end position 
agccttccgg
Secondary structure (Cloverleaf model)
>WENV180041760	SeC	TCA
                   t      GCCA agccttccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A          T T
                    T     T A C C C     A
      T C G        G      + | | | |     G
    G       T C G G       G T G G G     C
    G       + | | |                 T T
    T       G G C C
      G T          C     TGCTCCGGGTTAAGCCCCCGGTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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