The detailed information of tRNA gene sequence


Sequence ID>WENV180041775
Genome IDLLBZ010456852
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 3835
End posion on genome 3931
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cggaaactct
tRNA gene sequence 
GGGAGCGGATGGGGTGCTGGTGCCCCCCCCGGTCTTCAAAACCGAGCGGGAGGCGCGTCG
CGTCTCCGGTGGGTTCGATTCCCACCCGTTCCCGCCA
Downstream region at tRNA end position 
atgaaacggc
Secondary structure (Cloverleaf model)
>WENV180041775	SeC	TCA
                   t      GCCA atgaaacggc
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G - C          T T
                    A     C A C C C     A
      C G T        T      | | | | |     G
    T       G G G G       G T G G G     C
    G       | | | |                 T T
    G       C C C C
      T G C        C     GCGGGAGGCGCGTCGCGTCTCCG
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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