The detailed information of tRNA gene sequence


Sequence ID>WENV180041780
Genome IDLLBZ010466591
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1576
End posion on genome 1481
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttaccttt
tRNA gene sequence 
GGAAGAGACTCGCACCCCGGTGGGGCGCACGGACTTCAAATCCGGTGAGGGGCGTCAGAC
GTCCCTGGTGGGTTCGACTCCCACTCTTTTCCGCCA
Downstream region at tRNA end position 
caacatggga
Secondary structure (Cloverleaf model)
>WENV180041780	SeC	TCA
                   t      GCCA caacatggga
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T C
                    C     C A C C C     A
      C C C        T      | | | | |     G
    C       A C G C       G T G G G     C
    G         | | |                 T T
    G       G G C G
      T G G        C     TGAGGGGCGTCAGACGTCCCTG
                    A   G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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