The detailed information of tRNA gene sequence


Sequence ID>WENV180041784
Genome IDLLBZ010477565
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 84
End posion on genome 157
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttgtgtgaaa
tRNA gene sequence 
GGGACTGTAGCTCAGCGGTTAGAGCAGCGGGCTCATAACCTGTTGGTCGATGGTTCGAAT
CCATCCAGTCCCACtc
Downstream region at tRNA end position 
ggtgtaaaaa
Secondary structure (Cloverleaf model)
>WENV180041784	Ile2	CAT
                   a      ACtc ggtgtaaaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T A
                    T     C T A C C     A
      C G A        A      | | | | |     G
    G       C T C G       G A T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G + T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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