The detailed information of tRNA gene sequence


Sequence ID>WENV180041801
Genome IDLLBZ010497424
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 714
End posion on genome 812
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cttcggcttc
tRNA gene sequence 
GGAAGCGAGTCGGGTCTGGTGATCCGCGCGGCCTTCAAAGCCGTCCGGCCGCAGGCTAAT
ACCTGCGGCGGTGGGTTCGATTCCCACCCGCTTCCGCCA
Downstream region at tRNA end position 
accaccccgc
Secondary structure (Cloverleaf model)
>WENV180041801	SeC	TCA
                   c      GCCA accaccccgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   C          T T
                    G     C A C C C     A
      T C T        T      | | | | |     G
    G       G G G C       G T G G G     C
    G       + | | |                 T T
    T       T C C G
      G A          C     CCGGCCGCAGGCTAATACCTGCGGCG
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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