The detailed information of tRNA gene sequence


Sequence ID>WENV180041863
Genome IDLLBZ010616234
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 369
End posion on genome 280
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attaacattg
tRNA gene sequence 
GGAGAGGTCGCATAGCGGTTTAGTGCGCTGCCTTGGAAAGGCAGTAAGCCTTCACGGGCT
TCGCGGGTTCGAATCCCGCGCTCTCCGCCA
Downstream region at tRNA end position 
tttgattttt
Secondary structure (Cloverleaf model)
>WENV180041863	Ser	GGA
                   g      GCCA tttgattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G   G          T A
                    T     C G C C C     A
      C G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    T       G T G C
      T T A        G     TAAGCCTTCACGGGCTTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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