The detailed information of tRNA gene sequence


Sequence ID>WENV180041955
Genome IDLLBZ010789004
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 59
End posion on genome 154
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gaactcactc
tRNA gene sequence 
GAGAGTGCGAGGCATCCGGTGATGTCCTCGGTCTTCAAAACCGCTGACGGGGCGCTTTGC
GTTCCGTGGTGGGTTCGACTCCCATGCACTCTCGCAg
Downstream region at tRNA end position 
ccgtggactt
Secondary structure (Cloverleaf model)
>WENV180041955	SeC	TCA
                   c      GCAg ccgtggactt
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T C
                    G     T A C C C     A
      C C T        A      + | | | |     G
    G       A C G G       G T G G G     C
    G       | | + |                 T T
    T       T G T C
      G A          C     TGACGGGGCGCTTTGCGTTCCGTG
                    T   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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