The detailed information of tRNA gene sequence


Sequence ID>WENV180041972
Genome IDLLBZ010845247
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 17
End posion on genome 111
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gtctttccgc
tRNA gene sequence 
GGAGAGATCAGATCACTGGTGTGGTCAGCGGTCTTCAAAACCGTTTCGCGGGACACTGTC
TTGCGGGTAGGTTCGATTCCTGCATCTCTCCGCCA
Downstream region at tRNA end position 
ggcgaaccat
Secondary structure (Cloverleaf model)
>WENV180041972	SeC	TCA
                   c      GCCA ggcgaaccat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A          T T
                    C     C G T C C     A
      T C A        A      | + | | |     G
    G       C T A G       G T A G G     C
    G       | + | |                 T T
    T       G G T C
      G T          A     TTCGCGGGACACTGTCTTGCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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