The detailed information of tRNA gene sequence


Sequence ID>WENV180042015
Genome IDLLBZ010959306
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 377
End posion on genome 285
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgccacttct
tRNA gene sequence 
CCTGGCGTAGCACAATTGGCAGTGCAGCGGCCTCCAAAGCCGTAAGCCCCGGATTAGGGC
GTGATGCGAGTTCGAGTCTCGCCGCCAGTACCA
Downstream region at tRNA end position 
cgctcctatg
Secondary structure (Cloverleaf model)
>WENV180042015	Trp	CCA
                   t      ACCA cgctcctatg
                     C   T
                     C - G
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G C T C     A
      T A A        A      | | | | |     G
    T       C A C G       G C G A G     C
    G       | | | |                 T T
    G       G T G C
      C A          A     AAGCCCCGGATTAGGGCGTGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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