The detailed information of tRNA gene sequence


Sequence ID>WENV180042021
Genome IDLLBZ010962332
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 1340
End posion on genome 1431
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
attgtttgtt
tRNA gene sequence 
GGGGACGTAGCTCAATGGTAGAGCAGCGGGTTTATACCCCGTGGCGCCAGATAAGCGGCA
GGTTGTGGGTTCGAATCCCTCCGTCCCTACCA
Downstream region at tRNA end position 
atttcatttc
Secondary structure (Cloverleaf model)
>WENV180042021	Ile	TAT
                   t      ACCA atttcatttc
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
        A A        A      |   | | |     G
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGCGCCAGATAAGCGGCAGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  T       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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