The detailed information of tRNA gene sequence


Sequence ID>WENV180042028
Genome IDLLBZ010970900
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 270
End posion on genome 184
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttgtgtgt
tRNA gene sequence 
GGGAGGATGGCTGAGTGGTTTAAGGCATCGGTCTTGAAAACCGACGGGTATTTGTTTATC
TCGCAGGTTCGAATCCTGTTCCTCTCTtgg
Downstream region at tRNA end position 
cgactgtagc
Secondary structure (Cloverleaf model)
>WENV180042028	Ser	TGA
                   t      Ttgg cgactgtagc
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         + | |                 T T
    T       A G G C
      T T A        A     CGGGTATTTGTTTATCTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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