The detailed information of tRNA gene sequence


Sequence ID>WENV180042114
Genome IDLLBZ011223645
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 149
End posion on genome 62
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taaaaaaaat
tRNA gene sequence 
GGAGGCGTGGCTGAGTGGTTTAAGGCGCTTGTCTTGAAAACAAGAGACCGTTTACGCGGT
CCGGGAGTTCGAATCCCCCCGCCTCCGCag
Downstream region at tRNA end position 
aaacatttag
Secondary structure (Cloverleaf model)
>WENV180042114	Ser	TGA
                   t      GCag aaacatttag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | |   |     G
    G       G T C G       G G G A G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     AGACCGTTTACGCGGTCC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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