The detailed information of tRNA gene sequence


Sequence ID>WENV180042121
Genome IDLNFX01000035
Search identical group
Phylum/Class[LNFX] marine sediment metagenome; antarctic beach sand mud
Species
Start position on genome 4741
End posion on genome 4652
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcacttgttt
tRNA gene sequence 
GGAGAGTTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATGGGGTGAAACTCA
TCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
ttcaagtttg
Secondary structure (Cloverleaf model)
>WENV180042121	Ser	GCT
                   t      GCCA ttcaagtttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATGGGGTGAAACTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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