The detailed information of tRNA gene sequence


Sequence ID>WENV180042163
Genome IDLNFX01001290
Search identical group
Phylum/Class[LNFX] marine sediment metagenome; antarctic beach sand mud
Species
Start position on genome 158
End posion on genome 233
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgtgtatgt
tRNA gene sequence 
AGGCCAGTAGTTCAGTTGGTAGAGCGTCGGTCTCCAAAACCGAATGTCGGGGGTTCGAAT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gtttcgtatc
Secondary structure (Cloverleaf model)
>WENV180042163	Trp	CCA
                   t      GCCA gtttcgtatc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T T G       G G G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          G     ATGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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