The detailed information of tRNA gene sequence


Sequence ID>WENV180042279
Genome IDLQAE01000125
Search identical group
Phylum/Class[LQAE] bioreactor metagenome; bioreactor_1 inoculated with Wadden Sea sediment; 1st replicate of a sulfate-reducing system that
Species
Start position on genome 3536
End posion on genome 3461
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tttctatcaT
tRNA gene sequence 
GCGCTCATAGCTCAGCTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCAGAGGTTCGAA
TCCTCTTGGGCGTAAac
Downstream region at tRNA end position 
caaaaagagc
Secondary structure (Cloverleaf model)
>WENV180042279	Arg	TCT
                   T      AAac caaaaagagc
                     G + T
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     A - T          T A
                    T     T C T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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