The detailed information of tRNA gene sequence


Sequence ID>WENV180043372
Genome IDLQAH01038010
Search identical group
Phylum/Class[LQAH] bioreactor metagenome; bioreactor_4 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
Species
Start position on genome 294
End posion on genome 208
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnnnnnngt
tRNA gene sequence 
GCCGAAGTGGTGGAATTGGTAGACACGCTAGGTTCAGGGTCTAGTGGAGGTTTCTCCGTG
GAAGTTCGAGTCTTCTCTTCGGCACCA
Downstream region at tRNA end position 
tatttctgaa
Secondary structure (Cloverleaf model)
>WENV180043372	Leu	CAG
                   t      ACCA tatttctgaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       G G T G       G G A A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGGAGGTTTCTCCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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