The detailed information of tRNA gene sequence


Sequence ID>WENV180044184
Genome IDLQAJ01017839
Search identical group
Phylum/Class[LQAJ] bioreactor metagenome; bioreactor_6 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
Species
Start position on genome 500
End posion on genome 423
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagtaaattt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGA
GTCTCGTCACTCCCGCCA
Downstream region at tRNA end position 
ctttttttaa
Secondary structure (Cloverleaf model)
>WENV180044184	Asp	GTC
                   t      GCCA ctttttttaa
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     G
  T         C T C G       G C G A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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