The detailed information of tRNA gene sequence


Sequence ID>WENV180044198
Genome IDLQAJ01020732
Search identical group
Phylum/Class[LQAJ] bioreactor metagenome; bioreactor_6 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
Species
Start position on genome 356
End posion on genome 431
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atccacacga
tRNA gene sequence 
CGCGAGGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGAAT
CCTGTCCTCGCAACCA
Downstream region at tRNA end position 
aattgtctta
Secondary structure (Cloverleaf model)
>WENV180044198	fMet	CAT
                   a      ACCA aattgtctta
                     C   A
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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