The detailed information of tRNA gene sequence


Sequence ID>WENV180044263
Genome IDMAVD01000003
Search identical group
Phylum/Class[MAVD] viral metagenome; DNA from tracheal sample collected at farm Nasib, Godhra
Species
Start position on genome 17284
End posion on genome 17359
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tcctgcgccc
tRNA gene sequence 
GGCCCTTTAGCTCAGTGGTAAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAAT
CCAGCAAGGGCCACCA
Downstream region at tRNA end position 
gccgccacta
Secondary structure (Cloverleaf model)
>WENV180044263	Ile2	CAT
                   c      ACCA gccgccacta
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     C G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G C T G G     C
    G       | | | |                 T T
    T       G A G C
      A A          G     AGGTC
                    A   C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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