The detailed information of tRNA gene sequence


Sequence ID>WENV180044309
Genome IDMAVI01000252
Search identical group
Phylum/Class[MAVI] viral metagenome; RNA from tracheal sample collected at farm Ketul, Bansal
Species
Start position on genome 86
End posion on genome 161
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cacgggataa
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGGCGGTTCGATC
CCGCCTGGCTCCACCA
Downstream region at tRNA end position 
cgcttcgccc
Secondary structure (Cloverleaf model)
>WENV180044309	Ala	GGC
                   a      ACCA cgcttcgccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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