The detailed information of tRNA gene sequence


Sequence ID>WENV180044314
Genome IDMAVJ01000437
Search identical group
Phylum/Class[MAVJ] viral metagenome; RNA from tracheal sample collected at farm Nasib, Godhra
Species
Start position on genome 354
End posion on genome 428
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gctaaggagt
tRNA gene sequence 
CGGCGTGTAGCTCAGCGGGAGAGCACTACGTTGACATCGTAGGGGTCACAGGTTCAATCC
CTGTCACGCCCACCA
Downstream region at tRNA end position 
ttcgatctcc
Secondary structure (Cloverleaf model)
>WENV180044314	Val	GAC
                   t      ACCA ttcgatctcc
                     C   C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C          C T
                    T     T G T C C     A
        G A        A      | | | | |     A
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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