The detailed information of tRNA gene sequence


Sequence ID>WENV180045454
Genome IDMOXS02127308
Search identical group
Phylum/Class[MOXS] marine metagenome; 60 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 442
End posion on genome 515
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttcgctgcgt
tRNA gene sequence 
TGCGGGGTGGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCCCCCGCCCtca
Downstream region at tRNA end position 
cccnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180045454	fMet	CAT
                   t      Ctca cccnnnnnnn
                     T   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    T       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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