The detailed information of tRNA gene sequence


Sequence ID>WENV180045654
Genome IDMOXS02158463
Search identical group
Phylum/Class[MOXS] marine metagenome; 60 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 317
End posion on genome 219
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aattatttac
tRNA gene sequence 
GGAGATGTATGCGTCACTGGTGGGCGCCCCGGACTTCAAACCCGCGTGTGGGGCACTAAT
ACTGTCTCAGATAGGTTCGATTCCTATACATCTCCGCCA
Downstream region at tRNA end position 
acctacagaa
Secondary structure (Cloverleaf model)
>WENV180045654	SeC	TCA
                   c      GCCA acctacagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C
                     T - A          T T
                    A     T A T C C     A
      C A C        T      | | | | |     G
    T       T G C G       A T A G G     C
    G       + | | |                 T T
    G       G C G C
      T G G        C     GTGTGGGGCACTAATACTGTCTCAG
                    C   C
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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