The detailed information of tRNA gene sequence


Sequence ID>WENV180047081
Genome IDMPLT02176314
Search identical group
Phylum/Class[MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1887
End posion on genome 1813
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
actctaacga
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCAAGTTCGAA
TCTTGCCCCCGCTACta
Downstream region at tRNA end position 
cagaaacatt
Secondary structure (Cloverleaf model)
>WENV180047081	fMet	CAT
                   a      ACta cagaaacatt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T T C     A
      T G A        G      | | | | |     G
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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