The detailed information of tRNA gene sequence


Sequence ID>WENV180047198
Genome IDMPLT02192193
Search identical group
Phylum/Class[MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 398
End posion on genome 304
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acaaacaatt
tRNA gene sequence 
GGAGAGGTGGCCGAGTCTGGTTGAAGGCGCTTCCCTGCTAAGGAAGTAACGGGGTAACCC
TCCGTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aatacatcaa
Secondary structure (Cloverleaf model)
>WENV180047198	Ser	GCT
                   t      GCCA aatacatcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  T         G C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAACGGGGTAACCCTCCGTTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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