The detailed information of tRNA gene sequence


Sequence ID>WENV180047210
Genome IDMPLT02194130
Search identical group
Phylum/Class[MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 966
End posion on genome 893
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cttattatgc
tRNA gene sequence 
TGCGGGGTAGAGTAATTGGCAACTCGTCAGGCTCATAATCTGAAAATTATAGGTTCAAGT
CCTATCTCCGCGACta
Downstream region at tRNA end position 
tactactagc
Secondary structure (Cloverleaf model)
>WENV180047210	fMet	CAT
                   c      ACta tactactagc
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T G
                    T     T A T C C     A
      T A A        A      | | | | |     A
    T       T G A G       A T A G G     C
    G       | | | |                 T T
    G       A C T C
      C A          G     AAATT
                    T - A
                    C - G
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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