The detailed information of tRNA gene sequence


Sequence ID>WENV180047262
Genome IDMPLT02200977
Search identical group
Phylum/Class[MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1053
End posion on genome 1143
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctgaatctc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATAGGATAATCTCCT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtagcttagc
Secondary structure (Cloverleaf model)
>WENV180047262	Ser	GCT
                   c      GCCA gtagcttagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATAGGATAATCTCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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