The detailed information of tRNA gene sequence


Sequence ID>WENV180047462
Genome IDMPLT02224513
Search identical group
Phylum/Class[MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 52
End posion on genome 125
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
actatacaga
tRNA gene sequence 
AGCGGGGTAGAGCAGTCTGGTAGCTTGTAAGGCTCATAATCTTAAGGTCATAGGTTCGAA
TCCTGTCCCCGCCAttt
Downstream region at tRNA end position 
gtctccagtt
Secondary structure (Cloverleaf model)
>WENV180047462	fMet	CAT
                   a      Attt gtctccagtt
                     A   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | + | | |     G
    C       C G A G       A T A G G     C
    T       | | | +                 T T
    G       G C T T
      G T A        G     AGGTC
                    T - A
                    A - T
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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