The detailed information of tRNA gene sequence


Sequence ID>WENV180047970
Genome IDMPLT02288630
Search identical group
Phylum/Class[MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1355
End posion on genome 1257
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aattatttac
tRNA gene sequence 
GGAGATGTATGCGTCACTGGTGGGCGCCCCGGACTTCAAACCCGCGTGTGGGGCACTAAT
ACTGTCTCAGATAGGTTCGATTCCTATACATCTCCGCCA
Downstream region at tRNA end position 
ttctattgct
Secondary structure (Cloverleaf model)
>WENV180047970	SeC	TCA
                   c      GCCA ttctattgct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C
                     T - A          T T
                    A     T A T C C     A
      C A C        T      | | | | |     G
    T       T G C G       A T A G G     C
    G       + | | |                 T T
    G       G C G C
      T G G        C     GTGTGGGGCACTAATACTGTCTCAG
                    C   C
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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