The detailed information of tRNA gene sequence


Sequence ID>WENV180048028
Genome IDMPLT02295916
Search identical group
Phylum/Class[MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 41686
End posion on genome 41761
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tatcgtataT
tRNA gene sequence 
CGCGGAGTAGAGCAGTTTGGTAGCTCGTTGGGCTCATAACCCGAAGGTCAATGGTTCAAA
TCCATTCTCCGCTAAta
Downstream region at tRNA end position 
acaggttatt
Secondary structure (Cloverleaf model)
>WENV180048028	fMet	CAT
                   T      AAta acaggttatt
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T A C C     A
      T G A        A      | | | | |     A
    T       C G A G       A A T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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