The detailed information of tRNA gene sequence


Sequence ID>WENV180048354
Genome IDMPLT02339327
Search identical group
Phylum/Class[MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 42
End posion on genome 126
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catccaatgc
tRNA gene sequence 
GACGCTTTGGCCGAGTGGTTAAGGCGCTCGCCTGCTAAGTGAGTGGGCTCTGCCCGCGTG
GGTTCGAATCCCACAGGCGTCGCCA
Downstream region at tRNA end position 
ttttgcatcc
Secondary structure (Cloverleaf model)
>WENV180048354	Ser	GCT
                   c      GCCA ttttgcatcc
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     T + G
                     T - A          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGCTCTGCCCGC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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