The detailed information of tRNA gene sequence


Sequence ID>WENV180048445
Genome IDMPLT02350807
Search identical group
Phylum/Class[MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 543
End posion on genome 469
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atttcgtttT
tRNA gene sequence 
GAAGCCATGGCGTAATTGGTAGCGCGTCGGATTCCAAATCCGAAGGTTGGGGGTTCGATT
CCCTCTGGCTTCAAta
Downstream region at tRNA end position 
ttttttaact
Secondary structure (Cloverleaf model)
>WENV180048445	Trp	CCA
                   T      AAta ttttttaact
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     C - G
                     A - T          T T
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       T G C G       G G G G G     C
    G       + | | |                 T T
    G       G C G C
      T A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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