The detailed information of tRNA gene sequence


Sequence ID>WENV180048816
Genome IDMPLU02013260
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 192
End posion on genome 102
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctgaatctc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATAGGATAATCTCCT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtagcttagc
Secondary structure (Cloverleaf model)
>WENV180048816	Ser	GCT
                   c      GCCA gtagcttagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATAGGATAATCTCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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