The detailed information of tRNA gene sequence


Sequence ID>WENV180048919
Genome IDMPLU02020601
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1142
End posion on genome 1067
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tccccttggt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGTAGAGCACCACAATGGCATTGTGGGGGTCGCTGGTTCGAGA
CCAGTCGGCTCCACCA
Downstream region at tRNA end position 
tctttcttcc
Secondary structure (Cloverleaf model)
>WENV180048919	Ala	GGC
                   t      ACCA tctttcttcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          A G
                    T     T G A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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