The detailed information of tRNA gene sequence


Sequence ID>WENV180048943
Genome IDMPLU02022138
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1954
End posion on genome 1861
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ataaaaatat
tRNA gene sequence 
GGGAATGATTAGGTGGCTGGTGCCCCTCGCGGTCTTCAACACCGTTGTCTTATATATTGT
ATAAGAGCTGGGTTCAATTCCCAGGCGTTCCCGCta
Downstream region at tRNA end position 
aaattattta
Secondary structure (Cloverleaf model)
>WENV180048943	SeC	TCA
                   t      GCta aaattattta
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     A
    T       T G G A       C T G G G     C
    G         | | |                 T T
    G       C C C T
      T G C        C     TGTCTTATATATTGTATAAGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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