The detailed information of tRNA gene sequence


Sequence ID>WENV180048946
Genome IDMPLU02022619
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 912
End posion on genome 1006
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acaaacaatt
tRNA gene sequence 
GGAGAGGTGGCCGAGTCTGGTTGAAGGCGCTTCCCTGCTAAGGAAGTAACGGGGTAACCC
TCCGTTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aataaatcaa
Secondary structure (Cloverleaf model)
>WENV180048946	Ser	GCT
                   t      GCCA aataaatcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  T         G C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAACGGGGTAACCCTCCGTTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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