The detailed information of tRNA gene sequence


Sequence ID>WENV180049104
Genome IDMPLU02034458
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 105
End posion on genome 19
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttctaattat
tRNA gene sequence 
GCGGGGGTCGCCTAGCCTGGTAGGGCGTAGGATTGCTAATCCTATGTTCGCAAGAACTCG
TGGGTTCAAATCCCTCTCCCCGCGCCA
Downstream region at tRNA end position 
ttaaaactta
Secondary structure (Cloverleaf model)
>WENV180049104	Ser	GCT
                   t      GCCA ttaaaactta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     A
    C       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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