The detailed information of tRNA gene sequence


Sequence ID>WENV180049306
Genome IDMPLU02050179
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 260
End posion on genome 187
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttttaaaaat
tRNA gene sequence 
GGACCTGTAGCTCAGGGGTTAGAGCAGTCGGCTCATAACCGATCGGTCCACGGTTCAAAT
CCGTGCGGGTCCACta
Downstream region at tRNA end position 
ccaaatagca
Secondary structure (Cloverleaf model)
>WENV180049306	Ile2	CAT
                   t      ACta ccaaatagca
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     G T G C C     A
      G G A        A      | | | | |     A
    G       C T C G       C A C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     CGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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