The detailed information of tRNA gene sequence


Sequence ID>WENV180049406
Genome IDMPLU02057905
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 440
End posion on genome 515
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cctataaatt
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGCTGAGGGTTCGAGT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180049406	Trp	CCA
                   t      GCCA annnnnnnnn
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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