The detailed information of tRNA gene sequence


Sequence ID>WENV180049451
Genome IDMPLU02060297
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 103
End posion on genome 179
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgattcatgT
tRNA gene sequence 
GGGTTCGTAGCCTAGCCTGGTAGGGCGATGGTCTCCAAAACCATCGATCGTCGGTTCAAA
TCCGATCGGGCCCATCt
Downstream region at tRNA end position 
tttatgtttt
Secondary structure (Cloverleaf model)
>WENV180049451	Trp	CCA
                   T      ATCt tttatgtttt
                     G - C
                     G - C
                     G - C
                     T + G
                     T + G
                     C - G
                     G - C          T A
                    T     T A G C C     A
      C G A        A      + | | | |     A
    C       T C C G       G T C G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     CGATC
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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