The detailed information of tRNA gene sequence


Sequence ID>WENV180049686
Genome IDMPLU02077881
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 119
End posion on genome 214
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aagaacaatc
tRNA gene sequence 
cGGAGAGTTGAGGGTGCCTGGTGGCCCCCGCAGTCTTCAAAACTGTTGTCGGTCCGTGAC
CGGGCCGAGGTAGGTTCGATTCCTACCCTCTCCGCCAa
Downstream region at tRNA end position 
ttcccctatt
Secondary structure (Cloverleaf model)
>WENV180049686	SeC	TCA
                   c      CCAa ttcccctatt
                     c - G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    T     C A T C C     A
    C C G T        G      | | | | |     G
  T         G G G A       G T A G G     C
  G         | | |                   T T
  G         C C C C
    T G G          C     TGTCGGTCCGTGACCGGGCCGAG
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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