The detailed information of tRNA gene sequence


Sequence ID>WENV180049749
Genome IDMPLU02082811
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2242
End posion on genome 2156
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gactttttgt
tRNA gene sequence 
GCGGGGATCGCCTAGCCTGGTAGGGCGTAGGATTGCTAATCCTATGTCCGCAAGGACACG
GGGGTTCAAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
ttaaaactta
Secondary structure (Cloverleaf model)
>WENV180049749	Ser	GCT
                   t      GCCA ttaaaactta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTCCGCAAGGACAC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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