The detailed information of tRNA gene sequence


Sequence ID>WENV180049884
Genome IDMPLU02093981
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2845
End posion on genome 2769
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tcctctgggt
tRNA gene sequence 
CGCGGGGTGGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGCCGTTGGTTCAAA
TCCAACCCCCGCCACCA
Downstream region at tRNA end position 
cacggaaacc
Secondary structure (Cloverleaf model)
>WENV180049884	fMet	CAT
                   t      ACCA cacggaaacc
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      T G A        G      | | | | |     A
    T       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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