The detailed information of tRNA gene sequence


Sequence ID>WENV180049921
Genome IDMPLU02096939
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 23490
End posion on genome 23585
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gactgatctt
tRNA gene sequence 
GGAGGTGTCCGAGCGCCTGGTGGGCTCCCCCGCCTTCAAAGCGGGCGGGACGGGCGATCC
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
agtctgtcca
Secondary structure (Cloverleaf model)
>WENV180049921	SeC	TCA
                   t      GCCA agtctgtcca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C G        C      + | | | |     G
    T       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T G G        C     CGGGACGGGCGATCCCCGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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