The detailed information of tRNA gene sequence


Sequence ID>WENV180050003
Genome IDMPLU02102907
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 32270
End posion on genome 32194
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ctaaaatagt
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTAGAGCGTCCGCCTGTCACGCGGAAGGCCGAGGGTTCGAG
TCCCTTCACTCCCGCCA
Downstream region at tRNA end position 
cgttttttcg
Secondary structure (Cloverleaf model)
>WENV180050003	Asp	GTC
                   t      GCCA cgttttttcg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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